When Batman is missing, Dick Grayson and Damian Wayne try to protect Gotham City. Two new people, Batwoman and Batwing also help discover Batman's disappearance.
Aspiring young actress Maggie Nelson (Anna Paquin) gains chameleon-like powers after she is exposed to an electrical storm and a magic rune which her father, an Interpol agent, had brought home to study after it was found at the scene of a murder at a New York City museum. Her powers are from a secret and ancient race known as the Chameliel, who are able to hide in plain sight of the public due to their shape shifting abilities, and she is told all about the Chameliel after meeting a young Chameliel named Mosaic (Kirby Morrow). The murder victim at the museum was a Chameliel who was killed by another Chameliel named Maniken, who is intent on gaining the alchemical powers of his dead wife Facade, and ruling the world. After Maniken kidnaps her father, Maggie becomes determined to help Mosaic to fight Maniken.
Maya (Kavya Madhavan), a young television reporter works for New India Television. Radharamanan (Mukesh), the Managing Director of the channel has a fascination for Maya, who was brought up in an orphanage by Father Chanthakkadan (Thilakan). Maya herself takes up the responsibility of bringing up a few orphans, whom she has picked up from the streets. One of these kids is Devan (Master Devadas), who is sort of a child prodigy, with a computer-like mind and very good in studies and extra-curricular activities. R. C. Shekhar (Jackie Shroff, a scientist, lives very near their house, with his servant Damodaran (Harisree Ashokan). He is working on a project, which could help in making human beings invisible. On the very day that he successfully experiments his 'magic' potion on a rabbit, he is urgently called to the U.S as his daughter, who is studying there, meets with an accident.
Taking place after the series, the story opens in Bellwood as a mysterious black figure appears and immediately starts destroying things. Ben Tennyson (Graham Phillips), in the form of Heatblast (voiced by David Franklin), confronts him. After a short battle, Ben seemingly obliterates the villain, which is strange considering it was way too easy.
The evil Professor Klon (Aznil Nawawi) is back. This time, not only to overthrow the government and becomes the President of Metrofulus, but also to control the world's supply of fresh water through his ingenious plan: "Black Planet". When our blue planet has only 72 hours before turning black, Cicakman (Saiful Apek) comes to rescue.
Crime is on the run as the newly formed Justice League keeps Metropolis safe and this makes evil genius Lex Luthor very unhappy. Together with Black Manta, Sinestro and a gang of ruthless recruits, Lex builds his own league and declares them the Legion of Doom.
The documentary looks at the story behind Superman Lives, a film that was cancelled only three weeks before filming was set to begin. In the film Schnepp interviews several people involved with the development of the project and shows artwork and designs that would have been featured in Superman Lives if it had been made. Though the Run time is 104 minutes, there is an extended version of the film.
Foster Brenner, a successful film producer, is killed by a bomb hidden underneath the diving board of his swimming pool. Los Angeles Police Department Detective Jim Corrigan, who was having a relationship with Foster's daughter Aimee, starts investigating despite the case having been assigned to another officer. Jim interviews Flemming, Brenner's butler, who shows him security footage of two men in ski masks entering the complex and placing the bomb. Jim asks if Brenner had any enemies and Flemming replies that any man so wealthy and powerful has many enemies. Flemming tells Corrigan that several of Brenner's longtime collaborators were excluded in his latest films and were very unhappy about it.
The Joker escapes from Arkham Asylum, causing a nurse to be taken to intensive care after spraying some of his lethal gas in her face. Upon arriving in Gotham City, he kidnaps Councilman Johnson and his son shortly after brutally murdering the Councilman's wife. Determined not to let his archenemy murder anyone else, Batman hunts him through the city. After Councilman Johnson is found dead while his son remains in The Joker's captivity, Batman questions whether his crusade against evil does more bad than good. Batman tracks The Joker to a carnival, where he thwarts the villain's plot of bombing a ferris wheel. He then races to the location of The Joker and the councilman's son, but when the young boy kills The Joker with his own gun, Batman debates if his greatest nemesis' death is a step toward Gotham's peace, or rather a sign that things are getting worse.
Superman souhaite que Batman rejoigne sa nouvelle équipe de super-héros appelée la Ligue des Justiciers, mais Batman préfère faire cavalier seul. Après avoir vaincu le Pingouin qui essayait de voler un bijou hors de prix, ainsi que Man-Bat et le Joker, Superman s’envole, mais il disparaît en compagnie des vilains et de la pierre précieuse.